Progress in the study of Coxsackie A group 6 viruses

LIU Yinuo, SHI Yonglin

Anhui Journal of Preventive Medicine ›› 2025, Vol. 31 ›› Issue (1) : 58-62.

PDF(804 KB)
PDF(804 KB)
Anhui Journal of Preventive Medicine ›› 2025, Vol. 31 ›› Issue (1) : 58-62. DOI: 10.19837/j.cnki.ahyf.2025.01.012
Review

Progress in the study of Coxsackie A group 6 viruses

Author information +
History +

Abstract

In recent years,Coxsackie A group 6 (CV-A6) caused hand-foot-mouth disease (HFMD) has experienced global outbreaks,CV-A6 has become the dominant pathogen of HFMD.CV-A6 infection can cause fever,atypical herpes,and nail loss,and also complicate neurological diseases such as meningitis and encephalitis.In this study,we reviewed the pathogenetic characteristics of CV-A6,the pathogenic mechanism of CV-A6,and the genetic evolutionary relationship to provide valuable basis for the prevention and control of CV-A6 HFMD in the future.

Key words

CV-A6 / Epidemiology / Pathogenic mechanisms / Genetic evolution

Cite this article

Download Citations
LIU Yinuo , SHI Yonglin. Progress in the study of Coxsackie A group 6 viruses[J]. Anhui Journal of Preventive Medicine. 2025, 31(1): 58-62 https://doi.org/10.19837/j.cnki.ahyf.2025.01.012

References

[1]
Anh NT, Nhu LNT, van HMT, et al. Emerging coxsackievirus A6 causing hand,foot and mouth disease,Vietnam[J]. Emerg Infect Dis, 2018, 24(4):654-662.
[2]
Yang X, Li Y, Zhang C, et al. Clinical features and phylogenetic analysis of severe hand-foot-and-mouth disease caused by Coxsackievirus A6[J]. Infect Genet Evol, 2020, 77:104054.
[3]
孔志芳, 倪红霞, 杨斌, 等. 2018年浙江省宁海县柯萨奇病毒A组6型手足口病临床特征及分子流行病学[J]. 疾病监测, 2019, 34(11): 1005-1009.
[4]
Chiu HH, Liu MT, Chung WH, et al. The mechanism of onychomadesis (nail shedding) and beau’s lines following hand-foot-mouth disease[J]. Viruses, 2019, 11(6):522.
Background: Nail changes, including onychomadesis (nail shedding) and Beau’s line, following hand-foot-mouth disease (HFMD) are a common emergence at the stage of late complications of HFMD. However, the exact mechanism is still unknown. Therefore, we conducted this study to elucidate the mechanism of nail changes following HFMD. Methods: We collected 11 patients suffering from onychomadesis following HFMD. Nail samples from all of them were collected. Real time reverse transcription polymerase chain reaction (RT-PCR) and sequencing for human enteroviruses (HEV) were performed. Throat swabs for RT-PCR and sequencing for HEV were performed for three cases. Results: RT-PCR demonstrated the presence of Coxackievirus A6 (CVA6) in nail samples from three patients and one with Echovirus. Conclusion: In conclusion, we believe that the major cause of onychomadesis following HFMD is that certain novel viruses, mostly CVA6, are virulent and may damage nail matrix. Direct injury caused by cutaneous lesions of HFMD around nail matrix is a minor cause. There are still other virulent HEV which may result in onychomadesis. In addition, the novel strain of CVA6 also causes atypical clinical presentations, such as adult involvement and delayed-onset palmar and plantar desquamation. Physicians should be familiar with atypical presentations caused by novel viruses to avoid misdiagnosis and even inform patients of the possibility of onychomadesis that may take place weeks later to reassure patients.
[5]
Broccolo F, Drago F, Ciccarese G, et al. Severe atypical hand-foot-and-mouth disease in adults due to coxsackievirus A6:Clinical presentation and phylogenesis of CV-A6 strains[J]. J Clin Virol, 2019, 110:1-6.
Typically, hand-foot-and-mouth disease (HFMD) is a mild childhood illness associated with coxsackievirus (CV)-A16, CV-A6, enterovirus (EV)-A71.To identify the viral agents associated with severe cases of atypical HFMD in Italy.Epidemiologically unrelated cases of severe atypical HFMD admitted to the Emergency Room (ER) of IRCCS San Martino IST (Genoa, Italy) in 2014-2016 were investigated. Serologic screening for viral positivity was performed against exanthem-inducing agents. Ten cases with serology indicative of recent EV infection were selected. Molecular assays were used to detect viral genomes in blood [EVs, Parvovirus B19 (PVB19), herpesviruses (CMV; EBV, HHV-6, -7, -8)].CV-A6 was detected in 10 cases of severe atypical HFMD. Two cases were also infected with PVB19. Herpesviruses were not detected. Phylogenetic analysis mapped the CV-A6 strains into a single cluster related to two recent isolates from a German and an Asian child. Fever, systemic symptoms, severe vasculitis-like rash, and enanthem were predominant at presentation. Spontaneous recovery occurred in 1-3 weeks.CV-A6 is emerging as a frequent cause of severe atypical HFMD in Italian adults. This viral agent is disseminating worldwide. Dermatologists must identify the manifold alterations caused by EVs and understand the diagnostic power of current virology methods.Copyright © 2018 Elsevier B.V. All rights reserved.
[6]
Bian L, Wang Y, Yao X, et al. Coxsackievirus A6:a new emerging pathogen causing hand,foot and mouth disease outbreaks worldwide[J]. Expert Rev Anti Infect Ther, 2015, 13(9):1061-1071.
[7]
Noisumdaeng P, Sangsiriwut K, Prasertsopon J, et al. Complete genome analysis demonstrates multiple introductions of enterovirus 71 and coxsackievirus A16 recombinant strains into Thailand during the past decade[J]. Emerg Microbes Infect, 2018, 7(1):214.
[8]
熊艳森, 胡煊煊, 张春芳, 等. 九江市2017—2023年手足口病流行病学特征及CVA6 VP1基因特征分析[J]. 江苏预防医学, 2024, 35(3):376-378.
[9]
Song Y, Zhang Y, Ji T, et al. Persistent circulation of Coxsackievirus A6 of genotype D3 in mainland of China between 2008 and 2015[J]. Sci Rep, 2017, 7(1):5491.
A total of 807 entire VP1 sequences of Coxsackievirus A6 (CV-A6) from mainland of China from 1992 to 2015, including 520 in this study and 287 from the GenBank database, were analysed to provide a basic framework of molecular epidemiological characteristics of CV-A6 in China. Sixty-five VP1 sequences including 46 representative CV-A6 isolates from 807 Chinese strains and 19 international strains from GenBank were used for describing the genotypes and sub-genotypes. The results revealed that CV-A6 strains can be categorised into 4 genotypes designated as A, B, C, and D according to previous data and can be further subdivided into B1-B2, C1-C2, and D1-D3 sub-genotypes. D3 is the predominant sub-genotype that circulated in recent years in mainland of China and represents 734 of 807 Chinese isolates. Sixty-six strains belong to D2, whereas B1 and C1 comprise a single strain each, and five AFP strains formed B2. Sub-genotype D3 first circulated in 2008 and has become the predominant sub-genotype since 2009 and then reached a peak in 2013, while D2 was mostly undetectable in the past years. These data revealed different transmission stages of CV-A6 in mainland of China and that sub-genotype D3 may have stronger transmission ability.
[10]
孙箐爽, 董兆鹏, 臧昊, 等.2 011—2018年上海市金山区手足口病病原学监测结果及柯萨奇病毒A6型分离株VP1基因特征分析[J]. 实用预防医学, 2020, 27(1): 33-37.
[11]
Yoshitomi H, Ashizuka Y, Ichihara S, et al. Molecular epidemiology of coxsackievirus A6 derived from hand,foot,and mouth disease in Fukuoka between 2013 and 2017[J]. J Med Virol, 2018, 90(11):1712-1719.
Coxsackievirus (CV)-A6 has been the primary causative agent of hand, foot, and mouth disease (HFMD) in Japan since 2011. In Fukuoka, CV-A6-associated HFMD caused epidemics in 2013, 2015, and 2017. This paper reports the genetic characteristics of the CV-A6 entire viral protein 1 (VP1) derived from patients with HFMD in Fukuoka between 2013 and 2017. CV-A6 was detected in 105 of 280 clinical specimens, and the entire VP1 sequences could be analyzed for 90 of the 105 specimens. Phylogenetic analysis revealed that the CV-A6 strains were classified into clade A and subgrouped into subclade A3 or subclade A4. Each subclade strain carried amino acid substitutions in the presumed DE and GH loops of the VP1, and no amino acid substitutions were identified as deleterious to the protein function. No significant difference was found in the clinical symptoms between the genetic subclades using statistical analyses. In conclusion, this study clarified the genetic diversity of CV-A6 in Fukuoka from 2013 to 2017. The emergence of the CV-A6 strains was classified into derived new subclades based on phylogenetic analysis of the VP1 gene that may cause CV-A6-associated HFMD epidemics approximately every 2 years.© 2018 Wiley Periodicals, Inc.
[12]
Yi L, Zeng H, Zheng H, et al. Molecular surveillance of coxsackievirus A16 in Southern China,2008-2019[J]. Arch Virol, 2021, 166(6):1653-1659.
[13]
Zhu P, Ji W, Li D, et al. Current status of hand-foot-and-mouth disease[J]. J Biomed Sci, 2023, 30(1):15.
Hand-foot-and-mouth disease (HFMD) is a viral illness commonly seen in young children under 5 years of age, characterized by typical manifestations such as oral herpes and rashes on the hands and feet. These symptoms typically resolve spontaneously within a few days without complications. Over the past two decades, our understanding of HFMD has greatly improved and it has received significant attention. A variety of research studies, including epidemiological, animal, and in vitro studies, suggest that the disease may be associated with potentially fatal neurological complications. These findings reveal clinical, epidemiological, pathological, and etiological characteristics that are quite different from initial understandings of the illness. It is important to note that HFMD has been linked to severe cardiopulmonary complications, as well as severe neurological sequelae that can be observed during follow-up. At present, there is no specific pharmaceutical intervention for HFMD. An inactivated Enterovirus A71 (EV-A71) vaccine that has been approved by the China Food and Drug Administration (CFDA) has been shown to provide a high level of protection against EV-A71-related HFMD. However, the simultaneous circulation of multiple pathogens and the evolution of the molecular epidemiology of infectious agents make interventions based solely on a single agent comparatively inadequate. Enteroviruses are highly contagious and have a predilection for the nervous system, particularly in child populations, which contributes to the ongoing outbreak. Given the substantial impact of HFMD around the world, this Review synthesizes the current knowledge of the virology, epidemiology, pathogenesis, therapy, sequelae, and vaccine development of HFMD to improve clinical practices and public health efforts.© 2023. The Author(s).
[14]
Kimmis BD, Downing C, Tyring S. Hand-foot-and-mouth disease caused by coxsackievirus A6 on the rise[J]. Cutis, 2018, 102(5):353-356.
Hand-foot-and-mouth disease (HFMD) is a viral illness caused most commonly by coxsackievirus A16 (CVA16) and enterovirus 71 (EV71). The disease mainly affects pediatric populations younger than 5 years and is characterized by lesions of the oral mucosa, palms, and soles, lasting for 7 to 10 days. In recent years, CVA6 has become a major cause of HFMD outbreaks in the United States and worldwide. This strain also has been associated with adult HFMD. It affects broader demographics and causes more severe disease with unique findings compared to typical viral strands. Patients often have higher fever and longer duration of disease than typical HFMD and often present with more severe skin manifestations, spreading to a wider distribution than typical HFMD. We review the increasing prevalence of this viral illness to better characterize its clinical presentation.
[15]
Hoang MTV, Nguyen TA, Tran TT, et al. Clinical and aetiological study of hand,foot and mouth disease in southern Vietnam,2013-2015:Inpatients and outpatients[J]. Int J Infect Dis, 2019, 80:1-9.
Hand, foot and mouth disease (HFMD) has been associated with large outbreaks among young children in the Asia-Pacific Region since 1997, including cases of severe illness and death. Severe illness is often associated with enterovirus A71 (EV-A71). Vietnam experienced a large sustained outbreak of 200000 hospitalized cases and over 200 deaths in 2011-12, the large majority occurring in southern Vietnam.A prospective observational study was conducted in the outpatient clinics, infectious diseases wards, and paediatric intensive care units of the three main referral centres for the treatment of HFMD in southern Vietnam. Demographic data, basic laboratory parameters, and clinical data were recorded, and molecular diagnostic tests were performed.Between July 2013 and July 2015, a total of 1547 children were enrolled. Four serotypes of enterovirus A (EV-A71, Coxsackievirus (CV) A6, A10, and A16) were responsible for 1005 of 1327 diagnosed cases (75.7%). An unexpected dominance of EV-A71 was found among both inpatients and outpatients, as well as a strong association with severe illness. CV-A6 and CV-A10 emerged in Vietnam during the study period and replaced CV-A16. CV-A10 was associated with different clinical and laboratory characteristics. During admission, 119 children developed a more severe illness. It was found that children with a skin rash showed less progression of severity, but when a rash was present, a macular rash was significantly associated with an increased risk of progression.This study represents the most comprehensive descriptive HFMD study from Vietnam to date. Co-circulation and replacement of different serotypes has implications for vaccine development and implementation. These findings from a severely affected country add to our understanding of the presentation, progression, and aetiology of HFMD.Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.
[16]
Mirand A, Cohen R, Bisseux M, et al. A large-scale outbreak of hand,foot and mouth disease,France,as at 28 September 2021[J]. Eur Commun Dis Bull, 2021, 26(43):2100978.
[17]
叶文, 欧新华, 肖姗, 等. 2014—2019年长沙市手足口病病原谱及流行病学特征分析[J]. 中国病毒病杂志, 2022, 12(2): 133-137.
[18]
刘俊玲, 张相萍, 李爱军. 河南省安阳市龙安区2017—2021年手足口病病原学检测结果分析[J]. 安徽预防医学杂志, 2023, 29(6):497-500.
[19]
张曼, 陈淑红, 张勇, 等. 2015—2018年柯萨奇病毒A组6型在黑龙江省的持续流行[J]. 病毒学报, 2020, 36(2):201-206.
[20]
傅荔艳, 葛盈露, 马婉婉, 等. 2016—2020年安徽省手足口病流行病学特征及CVA6基因进化分析[J]. 病毒学报, 2023, 39(2):445-452.
[21]
谭昭麟, 吕莉琨, 李力, 等. 2013—2017年天津市柯萨奇病毒A6型分离株基因特征分析[J]. 中国病原生物学杂志, 2018, 13(11):1248-1252.
[22]
周伟, 张文艳, 朱引娣, 等. 合肥市2019—2022年手足口病流行特征及病原学检测结果分析[J]. 安徽预防医学杂志, 2024, 30(2):165-168.
[23]
Wang Z, Wang Y, Wang S, et al. Coxsackievirus A6 induces cell cycle arrest in G0/G1 phase for viral production[J]. Front Cell Infect Microbiol, 2018, 8:279.
[24]
Li D, Sun T, Tao L, et al. A mouse-adapted CVA6 strain exhibits neurotropism and triggers systemic manifestations in a novel murine model[J]. Emerg Microbes Infect, 2022, 11(1):2248-2263.
[25]
Sun T, Li D, Dai X, et al. Local immune dysregulation and subsequent inflammatory response contribute to pulmonary edema caused by Enterovirus infection in mice[J]. J Med Virol, 2023, 95(2):e28454.
[26]
Teo FMS, Nyo M, Wong AA, et al. Cytokine and chemokine profiling in patients with hand,foot and mouth disease in Singapore and Malaysia[J]. Sci Rep, 2018, 8(1):4087.
Hand, foot and mouth disease (HFMD) is a prevalent contagious childhood disease typically associated with fever, oral lesions and limb exanthema. While HFMD is caused by a plethora of serotypes of viruses under the genusEnteroviruswithin thePicornaviridaefamily, Coxsackievirus A16 (CV-A16) and Enterovirus 71 (EV-A71) are considered the main etiological agents. In recent years however, other viruses have also been isolated in considerable numbers from infected individuals in many regions, joining the legion commonly associated with HFMD. The present study investigated the cytokine and chemokine profiles of HFMD patients from Singapore and Malaysia for the first time. Comparative cohort studies of EV-A71-associated HFMD cases revealed that the Malaysia cohort had a distinct profile from the Singapore cohort, and this could be partly attributed by different EV-A71 genotypes. As the isolation of CV-A6, instead of CV-A16, had become prevalent in the Singapore cohort, it was also of particular interest to study the differential cytokine and chemokine profiles. Our data revealed that overlapping as well as unique profiles exist between the two major causative clinical isolates in the Singapore cohort. Having a better understanding of the respective immunological profiles could be useful for more accurate HFMD diagnosis, which is imperative for disease transmission control until multi-valent vaccines and/or broad-spectrum anti-viral drugs become available.
[27]
Muehlenbachs A, Bhatnagar J, Zaki SR. Tissue tropism, pathology and pathogenesis of enterovirus infection[J]. J Pathol, 2015, 235(2):217-228.
[28]
Sun Q, Li J, Wang R, et al. Coxsackievirus A6 infection causes neurogenic pathogenesis in a neonatal murine model[J]. Viruses, 2023, 15(2):511.
Coxsackievirus A6 (CVA6), a member of species A enterovirus, is associated with outbreaks of hand-foot-and-mouth disease and causes a large nationwide burden of disease. However, the molecular pathogenesis of CVA6 remains unclear. In the present study, we established a suckling Institute of Cancer Research (ICR) mouse infection model to explore the neural pathogenicity of CVA6. Five-day-old mice infected with CVA6 strain F219 showed lethargy and paralysis, and died 5 or 6 days after infection via IM injection. Cerebral edema and neuronal cell swelling were observed in the infected brain tissue, and we found that the CVA6 VP1 antigen could co-localize with GFAP-positive astrocytes in infected mouse brain using an immunofluorescence assay. CVA6 strain F219 can also infect human glioma (U251) cells. Transcriptome analysis of brain tissues from infected mice and infected U251 cells showed that significantly differentially expressed genes were enriched in antiviral and immune response and neurological system processes. These results indicate that CVA6 could cause neural pathogenesis and provide basic data for exploring the mechanism of how host–cell interactions affect viral replication and pathogenesis. Importance: Coxsackievirus A6 (CVA6) surpasses the two main pathogens, enterovirus 71 (EV-A71) and coxsackievirus A16 (CVA16), which are the leading pathogens causing HFMD in many provinces of China. In our study, CVA6 infection caused neurogenic pathogenesis in a neonatal murine model, manifesting as cerebral edema and neuronal cell swelling, CVA6 VP1 antigen could co-localize with GFAP-positive astrocytes in the infected mouse brain. Based on CVA6-infected brain tissue and U251 cell transcriptome analysis, we found upregulated antiviral and immune response-related genes such as Zbp1, Usp18, Oas2, Irf7, Ddx60, Ifit3, Ddx58, and Isg15, while the neurological system process-related genes were downregulated, including Fcrls, Ebnrb, Cdk1, and Anxa5.
[29]
Jin Y, Zhang R, Wu W, et al. Innate immunity evasion by enteroviruses linked to epidemic hand-foot-mouth disease[J]. Front Microbiol, 2018, 9:2422.
Enterovirus (EV) infections are a major threat to global public health, and are responsible for mild respiratory illness, hand, foot, and mouth disease (HFMD), acute hemorrhagic conjunctivitis, aseptic meningitis, myocarditis, severe neonatal sepsis-like disease, and acute flaccid paralysis epidemic. Among them, HFMD is a common pediatric infectious disease caused by EVs of the family Picornaviridae including EV-A71, coxsackieviruses (CV)-A2, CV-A6, CV-A10, and CV-A16. Due to lack of vaccines and specific antiviral therapeutics, millions of children still suffer from HFMD. Innate immune system detects foreign invaders by means of a relatively limited number of sensors, such as pattern recognition receptors (PRRs) [e.g., retinoic acid-inducible gene I (RIG-I)-like receptors (RLRs), Toll-like receptors (TLRs), and NOD-like receptors (NLRs)] and even some secreted functional proteins. However, a range of research, highlighted in this review, suggest that EV-associated with HFMD have evolved different strategies to avoid detection by innate immunity via different proteases (e.g., 2A, 3C, 2C, and 3D). Ongoing efforts to better understand virus-host interactions that control innate immunity and then distill how that influences HFMD development promises to have real-world significance. In this review, we address this complex topic in nine sections including multiple proteins associated with PRR and type I interferon (IFN) signaling. Recognizing how EVs linked to HFMD evade host innate immune system, we also describe the interactions between them and, finally, suggest future directions to better inform drug development and public health.
[30]
Zhou J, Shi Y, Miao L, et al. Molecular epidemiology and recombination of Enterovirus A71 in mainland China from 1987 to 2017[J]. Int Microbiol, 2021, 24(3):291-299.
Enterovirus A71 (EV-A71) is an important pathogen of severe hand, foot, and mouth disease (HFMD) in young children. This study aimed to retrospectively analyze the molecular epidemiology and recombination of EV-A71 in mainland China during 1987-2017. Phylogenetic tree showed that besides the previously reported subgenotypes A, B5, C0, C2, C3, and C4, a new subgenotype C6 emerged in mainland China. Recombination analysis indicated that C4 EV-A71 was derived from a common ancestor as a "double-recombinant" virus by intertypic recombination between C EV-A71 and CVA4, CVA5, CVA14, and CVA16 strains in P3 region and intratypic recombination between C and B EV-A71 strains in P2 region. The B5 EV-A71 shared high similarity with C EV-A71 in P1 region while it contained an unidentified sequence in P2 and P3 regions with two possible recombination patterns: one occurred between C4 EV-A71 and CVA3, CVA5, CVA6, CVA10, and CVA12 stains with one breakpoint in 3C, and the other occurred between C1, C2, C3, and C5 EV-A71 and CVA4, CVA5, CVA14, and CVA16 strains with two breakpoints in the 2A/2B junction and 3C. The C2 EV-A71 was probably a recombinant virus between C4 EV-A71 and CVA8 strains with two breakpoints located in the 5'UTR and 2A/2B junction. Moreover, an incredible recombination of C6 EV-A71 occurred between C4 and C2 EV-A71 with multiple breakpoints. Thus, continuous studies on EV-A71 genome characteristics are still useful and essential for monitoring emergence of new viruses and preventing HFMD outbreaks.© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG part of Springer Nature.
[31]
Cheng D, Chiu YW, Huang SW, et al. Genetic and cross neutralization analyses of coxsackievirus A16 circulating in Taiwan from 1998 to 2021 suggest dominant genotype B1 can serve as vaccine candidate[J]. Viruses, 2022, 14(10):2306.
Coxsackievirus A16 (CVA16) is well known for causing hand-foot-and-mouth disease (HFMD) and outbreaks were frequently reported in Taiwan in the past twenty years. The epidemiology and genetic variations of CVA16 in Taiwan from 1998 to 2021 were analyzed in this study. CVA16 infections usually occurred in early summer and early winter, and showed increased incidence in 1998, 2000–2003, 2005, 2007–2008, and 2010 in Taiwan. Little or no CVA16 was detected from 2017 to 2021. CVA16 infection was prevalent in patients between 1 to 3 years old. A total of 69 isolates were sequenced. Phylogenetic analysis based on the VP1 region showed that CVA16 subgenotype B1 was dominantly isolated in Taiwan from 1998 to 2019, and B2 was identified only from isolates collected in 1999 and 2000. There was a high frequency of synonymous mutations in the amino acid sequences of the VP1 region among CVA16 isolates, with the exception of position 145 which showed positive selection. The recombination analysis of the whole genome of CVA16 isolates indicated that the 5′-untranslated region and the non-structural protein region of CVA16 subgenotype B1 were recombined with Coxsackievirus A4 (CVA4) and enterovirus A71 (EVA71) genotype A, respectively. The recombination pattern of subgenotype B2 was similar to B1, however, the 3D region was similar to EVA71 genotype B. Cross-neutralization among CVA16 showed that mouse antisera from various subgenotypes viruses can cross-neutralize different genotype with high neutralizing antibody titers. These results suggest that the dominant CVA16 genotype B1 can serve as a vaccine candidate for CVA16.
[32]
Puenpa J, Saengdao N, Khanarat N, et al. Evolutionary and genetic recombination analyses of coxsackievirus A6 variants associated with hand,foot,and mouth disease outbreaks in Thailand between 2019 and 2022[J]. Viruses, 2022, 15(1):73.
Coxsackievirus (CV)-A6 infections cause hand, foot, and mouth disease (HFMD) in children and adults. Despite the serious public health threat presented by CV-A6 infections, our understanding of the mechanisms by which new CV-A6 strains emerge remains limited. This study investigated the molecular epidemiological trends, evolutionary dynamics, and recombination characteristics of CV-A6-associated HFMD in Thailand between 2019 and 2022. In the HFMD patient samples collected during the 4-year study period, we identified enterovirus (EV) RNA in 368 samples (48.7%), of which CV-A6 (23.7%) was the predominant genotype, followed by CV-A4 (6%), EV-A71 (3.7%), and CV-A16 (3.4%). According to the partial viral protein (VP) 1 sequences, all these CV-A6 strains belonged to the D3 clade. Based on the viral-RNA-dependent RNA polymerase (RdRp) gene, four recombinant forms (RFs), RF-A (147, 84.5%), RF-N (11, 6.3%), RF-H (1, 0.6%), and newly RF-Y (15, 8.6%), were identified throughout the study period. Results from the similarity plot and bootscan analyses revealed that the 3D polymerase (3Dpol) region of the D3/RF-Y subclade consists of sequences highly similar to CV-A10. We envisage that the epidemiological and evolutionarily insights presented in this manuscript will contribute to the development of vaccines to prevent the spread of CV-A6 infection.
[33]
Lau SKP, Zhao PSH, Sridhar S, et al. Molecular epidemiology of coxsackievirus A6 circulating in Hong Kong reveals common neurological manifestations and emergence of novel recombinant groups[J]. J Clin Virol, 2018, 108:43-49.
Coxsackievirus A6 (CV-A6) represents the predominant enterovirus serotype in Hong Kong, but its epidemiology in our population was unknown.To examine the clinical and molecular epidemiology of CV-A6 and detect emerging recombinant strains in Hong Kong.Nasopharyngeal aspirates (NPAs) from patients with febrile or respiratory illness were subject to RT-PCR for CV-A6 and sequencing of 5'-NCR and VP1. CV-A6-positive samples were further subject to 2C and 3D gene sequencing. Complete genome sequencing was performed on potential recombinant strains.Thirty-six (0.35%) NPAs were positive for CV-A6 by 5'-NCR RT-PCR and sequencing, 28 of which confirmed by partial VP1 gene sequencing. Among the 28 patients (mainly young children) with CV-A6 infection, hand-foot-and-mouth disease (HFMD) (43%), herpangina (18%) and tonsillitis (11%) were the most common diagnoses. Seven (25%) patients had neurological manifestations, including febrile seizures, encephalitis and meningitis. VP1 gene analysis showed that 24 CV-A6 strains circulating in Hong Kong belonged to genotype D5, while 4 strains belonged to D4. Further 2C and 3D gene analysis revealed eight potential recombinant strains. Genome sequencing of five selected strains confirmed four recombinant strains: HK459455/2013 belonging to recombination group RJ arisen from CV-A6/CV-A4, HK458288/2015 and HK446377/2015 representing novel group RL arisen from CV-A6/CV-A4, and HK462069/2015 representing novel group RM arisen from CV-A6/EV-A71. Recombination breakpoints located at 3D were identified in the latter three recombinant strains, with HK462069/2015 (from a child with encephalitis) having acquired 3D region from EV-A71.We identified novel recombinant CV-A6 strains in Hong Kong, with 3D being a common recombination site.Copyright © 2018. Published by Elsevier B.V.
[34]
Song Y, Zhang Y, Han Z, et al. Genetic recombination in fast-spreading coxsackievirus A6 variants:a potential role in evolution and pathogenicity[J]. Virus Evol, 2020, 6(2):veaa048.
[35]
董小聪, 纪望全, 陈帅印, 等. 中国柯萨奇病毒A组6型分离株全基因序列特征分析[J]. 中华疾病控制杂志, 2022, 26(6):740-744.
[36]
Wang SH, Wang A, Liu PP, et al. Divergent pathogenic properties of circulating coxsackievirus A6 associated with emerging hand,foot,and mouth disease[J]. J Virol, 2018, 92(11):e00303-18.
[37]
Pons-Salort M, Grassly NC. Serotype-specific immunity explains the incidence of diseases caused by human enteroviruses[J]. Science, 2018, 361(6404):800-803.
Human enteroviruses are a major cause of neurological and other diseases. More than 100 serotypes are known that exhibit unexplained complex patterns of incidence, from regular cycles to more irregular patterns, and new emergences. Using 15 years of surveillance data from Japan (2000-2014) and a stochastic transmission model with accurate demography, we show that acquired serotype-specific immunity can explain the diverse patterns of 18 of the 20 most common serotypes (including Coxsackieviruses, Echoviruses, and Enterovirus-A71). The remaining two serotypes required a change in viral characteristics, including an increase in pathogenicity for Coxsackievirus-A6, which is consistent with its recent global rise in incidence. On the basis of our findings, we are able to predict outbreaks 2 years ahead of time (2015-2016). These results have implications for the impact of vaccines under development.Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.
[38]
Yu F, Zhu R, Jia L, et al. Sub-genotype change and recombination of coxsackievirus A6s may be the cause of it being the predominant pathogen for HFMD in children in Beijing,as revealed by analysis of complete genome sequences[J]. Int J Infect Dis, 2020, 99:156-162.
[39]
Lu H, Xiao J, Wang W, et al. Evolutionary diversity of coxsackievirus A6 causing severe hand,foot,and mouth disease - China,2012-2023[J]. China CDC Wkly, 2024, 6(20):442-449.
[40]
He S, Chen M, Wu W, et al. An emerging and expanding clade accounts for the persistent outbreak of Coxsackievirus A6-associated hand,foot,and mouth disease in China since 2013[J]. Virology, 2018, 518:328-334.
[41]
苏志磊. 2016—2018年青岛地区手足口病柯萨奇病毒CA6基因特征分析[D]. 青岛: 青岛大学, 2020.
PDF(804 KB)

Accesses

Citation

Detail

Sections
Recommended

/